Miyakogusa Predicted Gene
- Lj5g3v1811400.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7N485_SOYBN |
1298 |
89.0 |
95.2 |
(tr|K7N485) Phenylalanine ammonia-lyase OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT2G37040.1 |
1225 |
82.5 |
91.9 |
| Symbols: PAL1, ATPAL1 | PHE ammonia lyase 1 | chr2:15557602-15560237 REVERSE LENGTH=725 |
| Medicago |
Medtr1g094780.1 |
1263 |
85.0 |
93.6 |
| phenylalanine ammonia-lyase-like protein | HC | chr1:42615628-42608692 | 20130731 |
| Soybean |
Glyma10g06600.1 |
1232 |
82.9 |
91.0 |
|
| LJGI |
gnl|LJGI|TC77778 |
1961 |
99.8 |
99.8 |
homologue to UniRef100_Q9SMK9 Cluster: Phenylalanine ammonia-lyase 2; n=1; Cicer arietinum|Rep: Phenylalanine ammonia-lyase 2 - Cicer arietinum (Chickpea) (Garbanzo), partial (46%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v1811400.1 |
length: 722 aa. |
| IPR001106 |
Aromatic amino acid lyase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0009058 |
biosynthetic process |
|
|
| Molecular Function |
GO:0016841 |
ammonia-lyase activity |
|
|
| HMMPfam |
PF00221 |
Lyase_aromatic |
5.2e-173 |
63-554 |
| IPR005922 |
Phenylalanine ammonia-lyase |
| Cellular Component |
GO:0005737 |
cytoplasm |
|
|
| Biological Process |
GO:0006559 |
L-phenylalanine catabolic process |
|
|
| Molecular Function |
GO:0016841 |
ammonia-lyase activity |
|
|
| HMMTigr |
TIGR01226 |
phe_am_lyase: |
0 |
31-712 |
| IPR008948 |
L-Aspartase-like |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| superfamily |
SSF48557 |
L-aspartase-like |
1.2e-271 |
30-722 |
| IPR022313 |
Phenylalanine/histidine ammonia-lyases, active site |
| Molecular Function |
GO:0016841 |
ammonia-lyase activity |
|
|
| PatternScan |
PS00488 |
PAL_HISTIDASE |
NA |
204-220 |
| IPR023144 |
Phenylalanine ammonia-lyase, shielding domain |
| Gene3D |
G3DSA:1.10.274.20 |
no description |
1e-59 |
541-656 |
| IPR024083 |
Fumarase/histidase, N-terminal |
| Gene3D |
G3DSA:1.10.275.10 |
no description |
4e-90 |
30-267 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.200.10 |
no description |
7.8e-140 |
657-711 |
| HMMPanther |
PTHR32364 |
FAMILY |
0 |
14-722 |
| HMMPanther |
PTHR32364:SF2 |
SUBFAMILY |
0 |
14-722 |
| Seg |
seg |
seg |
NA |
4-20 |
- Wolf-PSORT
Lj5g3v1811400.1 chlo 4, cyto 2, plas 2, E.R. 2, E.R._plas 2, cyto_E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v1811400.1 |
|