Miyakogusa Predicted Gene

Lj5g3v1796810.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1LCX7_SOYBN 948 86.3 91.5 (tr|I1LCX7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G54850.1 736 68.0 82.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20321524-20323848 FORWARD LENGTH=632
Medicago Medtr1g094215.1 931 86.9 91.5 | armadillo/beta-catenin repeat protein | HC | chr1:42424079-42419604 | 20130731
Soybean Glyma10g35220.1 948 86.3 91.5  
LJGI gnl|LJGI|FS350620 1043 100.0 100.0 similar to UniRef100_A7PI07 Cluster: Chromosome chr13 scaffold_17, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_17, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1796810.1 length: 553 aa.
IPR000225 Armadillo
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00514 Arm 3.7e-06 297-336
380-418
HMMSmart SM00185 Armadillo/beta-catenin-like 20 297-337
338-378
379-419
420-460
461-501
ProfileScan PS50176 ARM_REPEAT 9.327 308-350
349-391
IPR003613 U box domain
Cellular Component GO:0000151 ubiquitin ligase complex    
Molecular Function GO:0004842 ubiquitin-protein ligase activity    
Biological Process GO:0016567 protein ubiquitination    
HMMPfam PF04564 U-box 9.2e-21 170-240
HMMSmart SM00504 Modified 2.3e-34 173-236
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 3.2e-53 267-538
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 2.8e-33 170-242
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 2.6e-47 267-541
no_ID  
Coil coil coiled-coil NA 49-70
505-526
HMMPanther PTHR23315 BETA 3.1e-180 14-552
HMMPanther PTHR23315:SF7 ANKYRIN-REPEAT-ARM 3.1e-180 14-552
Seg seg seg NA 385-399
superfamily SSF57850 RING/U-box 5.5e-29 152-249
Wolf-PSORT
Lj5g3v1796810.1	plas 7.5, golg_plas 5.5, golg 2.5, vacu 2, chlo 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1796810.1