Miyakogusa Predicted Gene

Lj5g3v1796800.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LCX5_SOYBN 1006 85.3 89.7 (tr|I1LCX5) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G54860.1 840 69.8 83.0 | Symbols: ATVPS33, VPS33 | Sec1/munc18-like (SM) proteins superfamily | chr3:20324286-20329841 REVERSE LENGTH=592
Medicago Medtr1g094200.1 981 83.4 90.0 | vacuolar protein sorting-associated protein | HC | chr1:42397041-42408094 | 20130731
Soybean Glyma10g35210.1 994 82.7 86.9  
LJGI gnl|LJGI|GO013031 1187 98.6 98.6 similar to UniRef100_A7PI05 Cluster: Chromosome chr13 scaffold_17, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_17, whole genome shotgun sequence - Vitis vinifera (Grape), partial (49%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1796800.1 length: 572 aa.
IPR001619 Sec1-like protein
method AccNumber shortName E-value location
Biological Process GO:0006904 vesicle docking involved in exocytosis    
Biological Process GO:0016192 vesicle-mediated transport    
HMMPanther PTHR11679 VESICLE 1.9e-213 1-572
HMMPfam PF00995 Sec1 3.5e-99 35-568
superfamily SSF56815 Sec1/munc18-like 6.6e-120 9-568
IPR027121 Vacuolar protein sorting-associated protein 33
Biological Process GO:0016192 vesicle-mediated transport    
HMMPanther PTHR11679:SF1 VACUOLAR 1.9e-213 1-572
IPR027482 Sec1-like, domain 2
Gene3D G3DSA:3.40.50.1910 no description 8.3e-13 475-568
no_ID  
Gene3D G3DSA:3.90.830.10 no description 5.4e-15 243-351
Seg seg seg NA 119-130
312-323
541-556
Wolf-PSORT
Lj5g3v1796800.1	golg 4, cyto 3, vacu 2, E.R. 2, cyto_nucl 2, E.R._vacu 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1796800.1