Miyakogusa Predicted Gene

Lj5g3v1774920.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NHM3_SOYBN 462 56.7 63.6 (tr|I1NHM3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G10770.2 123 50.3 62.3 | Symbols: | Single-stranded nucleic acid binding R3H protein | chr3:3372461-3374026 REVERSE LENGTH=325
Medicago Medtr1g092900.1 439 51.2 58.2 | single-stranded nucleic acid-binding protein R3H | HC | chr1:41836624-41841551 | 20130731
Soybean Glyma20g32800.2 462 56.7 63.6  
LJGI gnl|LJGI|TC78336 1037 99.8 99.8 similar to UniRef100_A7QLJ1 Cluster: Chromosome undetermined scaffold_119, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_119, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1774920.2 length: 453 aa.
IPR001374 Single-stranded nucleic acid binding R3H
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMSmart SM00393 Putative 0.00029 58-142
ProfileScan PS51061 R3H 11.613 74-143
IPR024771 SUZ domain
HMMPfam PF12752 SUZ 1.9e-12 168-217
IPR024773 R3H domain-containing protein, viridiplantae
HMMPanther PTHR15672:SF1 R3H 4.8e-64 52-336
no_ID  
Coil coil coiled-coil NA 189-210
Gene3D G3DSA:3.30.1370.50 no description 1e-12 77-144
HMMPanther PTHR15672 CAMP-REGULATED 4.8e-64 52-336
Seg seg seg NA 35-51
179-198
208-226
242-250
303-316
373-387
429-443
superfamily SSF82708 R3H 2.2e-30 46-179
Wolf-PSORT
Lj5g3v1774920.2	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1774920.2