Miyakogusa Predicted Gene

Lj5g3v1771500.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1NHN1_SOYBN 511 58.0 66.4 (tr|I1NHN1) Uncharacterized protein OS=Glycine max PE=4 SV=2

TAIR_pep --No_Hits--

Medicago Medtr1g492940.5 445 49.0 58.0 | XS domain protein | HC | chr1:41678093-41683839 | 20130731

Soybean Glyma20g32880.1 511 58.0 66.4

LJGI gnl|LJGI|TC80613 795 100.0 100.0 similar to UniRef100_A8REZ2 Cluster: Glycoprotein 3; n=1; Equine arteritis virus|Rep: Glycoprotein 3 - Equine arteritis virus (EAV), partial (10%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v1771500.1 length: 493 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 54-71
77-86
106-118

Wolf-PSORT

Lj5g3v1771500.1 nucl 12, plas 1, pero 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v1771500.1 Not targeted -44.635 -0.162 -1.936 63.77% -42.537

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1NHN1_SOYBN	511	58.0	66.4	(tr\|I1NHN1) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep	--No_Hits--
Medicago	Medtr1g492940.5	445	49.0	58.0	\| XS domain protein \| HC \| chr1:41678093-41683839 \| 20130731
Soybean	Glyma20g32880.1	511	58.0	66.4
LJGI	gnl\|LJGI\|TC80613	795	100.0	100.0	similar to UniRef100_A8REZ2 Cluster: Glycoprotein 3; n=1; Equine arteritis virus\|Rep: Glycoprotein 3 - Equine arteritis virus (EAV), partial (10%)

no_ID
Lj5g3v1771500.1				length: 493 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	54-71 77-86 106-118