Miyakogusa Predicted Gene
- Lj5g3v1770480.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7N4D2_SOYBN |
281 |
88.0 |
92.8 |
(tr|K7N4D2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G36360.2 |
182 |
58.3 |
73.1 |
| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr2:15243461-15247523 REVERSE LENGTH=496 |
| Medicago |
Medtr1g492850.2 |
269 |
82.6 |
89.2 |
| galactose oxidase/kelch repeat protein | HC | chr1:41637589-41646075 | 20130731 |
| Soybean |
Glyma20g32900.1 |
274 |
90.4 |
94.9 |
|
| LJGI |
gnl|LJGI|TC70606 |
381 |
98.5 |
98.5 |
homologue to UniRef100_A7QBH1 Cluster: Chromosome chr13 scaffold_74, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_74, whole genome shotgun sequence - Vitis vinifera (Grape), partial (4%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v1770480.2 |
length: 168 aa. |
| IPR015915 |
Kelch-type beta propeller |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| Gene3D |
G3DSA:2.120.10.80 |
no description |
5e-08 |
8-77 |
| no_ID |
|
| HMMPanther |
PTHR23244 |
KELCH |
7.1e-58 |
1-143 |
| HMMPanther |
PTHR23244:SF96 |
PREDICTED |
7.1e-58 |
1-143 |
| HMMPfam |
PF13415 |
Kelch_3 |
2.2e-05 |
8-50 |
| superfamily |
SSF117281 |
Kelch |
1.5e-08 |
8-79 |
- Wolf-PSORT
Lj5g3v1770480.2 nucl 7, chlo 2, cyto 2, mito 1, extr 1, cysk 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v1770480.2 |
Not targeted |
-46.046 |
0 |
-4.811 |
66.75% |
-41.235
|