Miyakogusa Predicted Gene

Lj5g3v1749290.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MS92_SOYBN 867 90.5 95.2 (tr|I1MS92) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G19170.1 727 76.6 86.2 | Symbols: | Pectin lyase-like superfamily protein | chr1:6616777-6618875 FORWARD LENGTH=506
Medicago Medtr4g124980.1 864 90.7 95.4 | pectin lyase superfamily protein | HC | chr4:51842179-51838098 | 20130731
Soybean Glyma17g05550.1 867 90.5 95.2  
LJGI gnl|LJGI|TC61381 1261 99.8 99.8 similar to UniRef100_A7PDT4 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1749290.1 length: 454 aa.
IPR000743 Glycoside hydrolase, family 28
method AccNumber shortName E-value location
Molecular Function GO:0004650 polygalacturonase activity    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF00295 Glyco_hydro_28 1.2e-45 170-439
IPR006626 Parallel beta-helix repeat
HMMSmart SM00710 Parallel 8.1e+03 241-268
269-290
303-325
331-352
360-381
394-416
421-442
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 3.3e-107 54-453
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 1e-120 68-453
no_ID  
HMMPanther PTHR31339 FAMILY 2.9e-185 27-453
HMMPanther PTHR31339:SF0 SUBFAMILY 2.9e-185 27-453
Wolf-PSORT
Lj5g3v1749290.1	chlo 5, cyto 4.5, cyto_nucl 3, chlo_mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1749290.1