Miyakogusa Predicted Gene

Lj5g3v1737150.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1NHP3_SOYBN 84.0 60.8 71.6 (tr|I1NHP3) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT3G52230.1 67.4 58.6 72.4 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast outer membrane, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:19371325-19372397 FORWARD LENGTH=145

Medicago Medtr1g492600.1 77.8 61.9 74.6 | transmembrane protein, putative | HC | chr1:41501604-41499251 | 20130731

Soybean Glyma20g33020.1 84.0 60.8 71.6

LJGI gnl|LJGI|TC74904 710 100.0 100.0 similar to UniRef100_A7QBK6 Cluster: Chromosome chr13 scaffold_74, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_74, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v1737150.1 length: 130 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 19-38
52-60

Wolf-PSORT

Lj5g3v1737150.1 nucl 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v1737150.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1NHP3_SOYBN	84.0	60.8	71.6	(tr\|I1NHP3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT3G52230.1	67.4	58.6	72.4	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast outer membrane, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr3:19371325-19372397 FORWARD LENGTH=145
Medicago	Medtr1g492600.1	77.8	61.9	74.6	\| transmembrane protein, putative \| HC \| chr1:41501604-41499251 \| 20130731
Soybean	Glyma20g33020.1	84.0	60.8	71.6
LJGI	gnl\|LJGI\|TC74904	710	100.0	100.0	similar to UniRef100_A7QBK6 Cluster: Chromosome chr13 scaffold_74, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr13 scaffold_74, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)

no_ID
Lj5g3v1737150.1				length: 130 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	19-38 52-60