Miyakogusa Predicted Gene

Lj5g3v1699430.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL P93769_TOBAC 899 96.6 99.3 (tr|P93769) Elongation factor 1-alpha OS=Nicotiana tabacum GN=tel1 PE=2 SV=1
TAIR_pep AT5G60390.3 892 96.0 98.9 | Symbols: | GTP binding Elongation factor Tu family protein | chr5:24289226-24290675 FORWARD LENGTH=449
Medicago Medtr1g495705.2 886 95.3 98.2 | GTP-binding elongation factor Tu family protein | HC | chr1:43065251-43067970 | 20130731
Soybean Glyma16g07350.1 904 97.3 99.3  
LJGI gnl|LJGI|TC73117 1459 88.9 88.9 homologue to UniRef100_Q3LUM2 Cluster: Elongation factor 1-alpha; n=1; Gossypium hirsutum|Rep: Elongation factor 1-alpha - Gossypium hirsutum (Upland cotton) (Gossypium mexicanum), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1699430.1 length: 447 aa.
IPR000795 Elongation factor, GTP-binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
FPrintScan PR00315 ELONGATNFCT 1.4e-23 9-22
68-76
88-98
104-115
148-157
HMMPfam PF00009 GTP_EFTU 2e-55 7-222
PatternScan PS00301 EFACTOR_GTP NA 61-76
IPR004160 Translation elongation factor EFTu/EF1A, C-terminal
Molecular Function GO:0005525 GTP binding    
HMMPfam PF03143 GTP_EFTU_D3 1.3e-31 322-429
IPR004161 Translation elongation factor EFTu/EF1A, domain 2
Molecular Function GO:0005525 GTP binding    
HMMPfam PF03144 GTP_EFTU_D2 1.2e-16 248-314
IPR004539 Translation elongation factor EF1A, eukaryotic/archaeal
Molecular Function GO:0003746 translation elongation factor activity    
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006414 translational elongation    
HMMTigr TIGR00483 EF-1_alpha: 6.1e-213 1-433
IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel
superfamily SSF50447 Translation 2.5e-30 231-324
IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
superfamily SSF50465 EF-Tu/eEF-1alpha/eIF2-gamma 6.3e-40 325-431
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.2e-91 2-249
no_ID  
Gene3D G3DSA:2.40.30.10 no description 2.5e-50 230-337
338-429
Gene3D G3DSA:3.40.50.300 no description 1.5e-83 4-226
HMMPanther PTHR23115 TRANSLATION 1.8e-232 1-445
HMMPanther PTHR23115:SF37 ELONGATION 1.8e-232 1-445
Wolf-PSORT
Lj5g3v1699430.1	cyto 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1699430.1