Miyakogusa Predicted Gene

Lj5g3v1699090.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N4F6_SOYBN 1228 73.5 77.6 (tr|K7N4F6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G04460.3 772 52.2 61.1 | Symbols: | RING/U-box superfamily protein | chr5:1260009-1263695 FORWARD LENGTH=863
Medicago Medtr1g090803.1 1193 72.1 76.7 | RING/U-box protein | HC | chr1:40822523-40829027 | 20130731
Soybean Glyma20g33300.1 1159 71.2 74.2  
LJGI gnl|LJGI|TC76383 864 100.0 100.0 similar to UniRef100_UPI0000196BA3 Cluster: protein binding / zinc ion binding; n=1; Arabidopsis thaliana|Rep: protein binding / zinc ion binding - Arabidopsis thaliana, partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1699090.1 length: 853 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50089 ZF_RING_2 10.719 801-840
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.9e-07 795-845
no_ID  
Coil coil coiled-coil NA 730-751
HMMPanther PTHR10044 INHIBITOR 1.5e-87 231-845
HMMPanther PTHR10044:SF7 INHIBITOR 1.5e-87 231-845
HMMPfam PF13920 zf-C3HC4_3 1.2e-12 798-845
Seg seg seg NA 72-89
165-178
221-234
242-253
270-275
281-294
298-308
349-369
615-630
690-705
superfamily SSF57850 RING/U-box 2.1e-07 793-852
Wolf-PSORT
Lj5g3v1699090.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1699090.1