Miyakogusa Predicted Gene
- Lj5g3v1698980.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1NHS2_SOYBN |
545 |
52.2 |
63.5 |
(tr|I1NHS2) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT5G04410.1 |
273 |
70.3 |
82.9 |
| Symbols: NAC2, anac078 | NAC domain containing protein 2 | chr5:1243980-1246416 FORWARD LENGTH=567 |
| Medicago |
Medtr1g090723.4 |
587 |
55.1 |
68.7 |
| NAC transcription factor-like protein | HC | chr1:40735738-40739270 | 20130731 |
| Soybean |
Glyma20g33390.1 |
276 |
50.9 |
61.8 |
|
| LJGI |
gnl|LJGI|TC69110 |
1663 |
100.0 |
100.0 |
similar to UniRef100_Q8LRL6 Cluster: Nam-like protein 9; n=1; Petunia x hybrida|Rep: Nam-like protein 9 - Petunia hybrida (Petunia), partial (5%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v1698980.1 |
length: 596 aa. |
| IPR003441 |
No apical meristem (NAM) protein |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003677 |
DNA binding |
|
|
| Biological Process |
GO:0006355 |
regulation of transcription, DNA-dependent |
|
|
| HMMPfam |
PF02365 |
NAM |
2.6e-45 |
6-132 |
| ProfileScan |
PS51005 |
NAC |
52.833 |
5-156 |
| superfamily |
SSF101941 |
NAC |
4e-53 |
1-157 |
| no_ID |
|
| HMMPanther |
PTHR31989 |
FAMILY |
2.5e-90 |
1-422 |
| HMMPanther |
PTHR31989:SF0 |
SUBFAMILY |
2.5e-90 |
1-422 |
| Seg |
seg |
seg |
NA |
310-323 |
- Wolf-PSORT
Lj5g3v1698980.1 E.R. 3, chlo 2, cyto 2, mito 2, golg 2, chlo_mito 2, E.R._vacu 2, E.R._plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v1698980.1 |
|