Miyakogusa Predicted Gene

Lj5g3v1698890.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NHS8_SOYBN 373 59.7 65.0 (tr|I1NHS8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G04390.1 211 38.3 46.8 | Symbols: | C2H2-type zinc finger family protein | chr5:1239166-1240254 FORWARD LENGTH=362
Medicago Medtr1g090703.1 342 56.4 60.5 | C2H2-type zinc finger protein | HC | chr1:40689061-40690814 | 20130731
Soybean Glyma20g33480.1 373 59.7 65.0  
LJGI gnl|LJGI|TC78216 81.8 86.5 86.5 homologue to UniRef100_A7PQP3 Cluster: Chromosome chr6 scaffold_25, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_25, whole genome shotgun sequence - Vitis vinifera (Grape), partial (33%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1698890.1 length: 352 aa.
IPR007087 Zinc finger, C2H2
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 152-172
233-253
ProfileScan PS50157 ZINC_FINGER_C2H2_2 10.429 150-177
231-258
IPR015880 Zinc finger, C2H2-like
HMMSmart SM00355 zinc 0.01 150-172
231-253
no_ID  
HMMPanther PTHR26374 FAMILY 2.2e-31 149-262
HMMPanther PTHR26374:SF121SUBFAMILY NOT 2.2e-31 149-262
HMMPfam PF13912 zf-C2H2_6 3.6e-10 149-174
230-255
Seg seg seg NA 56-84
177-184
215-228
284-292
310-337
superfamily SSF57667 C2H2 1.7e-09 148-253
Wolf-PSORT
Lj5g3v1698890.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1698890.1