Miyakogusa Predicted Gene

Lj5g3v1697440.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LKD2_SOYBN 1965 80.6 86.7 (tr|K7LKD2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G06880.2 147 24.8 48.6 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:2170516-2175686 REVERSE LENGTH=1264
Medicago Medtr1g090320.2 1875 77.2 85.6 | E3 ubiquitin-protein ligase LIN-like protein, putative | HC | chr1:40463443-40471419 | 20130731
Soybean Glyma10g33850.1 624 85.5 91.0  
LJGI gnl|LJGI|DC593518 1072 99.1 99.1 similar to UniRef100_A7NSU7 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1697440.1 length: 1195 aa.
IPR003613 U box domain
method AccNumber shortName E-value location
Cellular Component GO:0000151 ubiquitin ligase complex    
Molecular Function GO:0004842 ubiquitin-protein ligase activity    
Biological Process GO:0016567 protein ubiquitination    
HMMPfam PF04564 U-box 2.4e-15 512-583
HMMSmart SM00504 Modified 2.4e-27 514-578
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 6e-12 1103-1154
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 6.3e-25 510-575
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 2.3e-12 660-1153
no_ID  
Coil coil coiled-coil NA 1113-1134
HMMPanther PTHR22849 WDSAM1 1.9e-28 501-590
Seg seg seg NA 221-231
337-356
438-452
946-959
superfamily SSF57850 RING/U-box 2.4e-23 510-585
Wolf-PSORT
Lj5g3v1697440.1	chlo 6, nucl 5, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1697440.1