| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7LKD2_SOYBN | 2527 | 82.5 | 88.3 | (tr|K7LKD2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT3G06880.2 | 265 | 26.5 | 50.3 | | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:2170516-2175686 REVERSE LENGTH=1264 |
| Medicago | Medtr1g090320.2 | 2440 | 79.9 | 87.4 | | E3 ubiquitin-protein ligase LIN-like protein, putative | HC | chr1:40463443-40471419 | 20130731 |
| Soybean | Glyma05g35600.1 | 692 | 42.2 | 60.5 | |
| LJGI | gnl|LJGI|DC593518 | 1072 | 99.1 | 99.1 | similar to UniRef100_A7NSU7 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%) |
| Lj5g3v1697430.1 | length: 1485 aa. | |||
| IPR001680 | WD40 repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005515 | protein binding | ||
| HMMPfam | PF00400 | WD40 | 0.063 | 1208-1232 1241-1273 1454-1482 |
| HMMSmart | SM00320 | WD40 | 0.025 | 1194-1232 1237-1274 1442-1483 |
| ProfileScan | PS50082 | WD_REPEATS_2 | 10.642 | 1219-1232 1244-1277 1451-1485 |
| IPR003613 | U box domain | |||
| Cellular Component | GO:0000151 | ubiquitin ligase complex | ||
| Molecular Function | GO:0004842 | ubiquitin-protein ligase activity | ||
| Biological Process | GO:0016567 | protein ubiquitination | ||
| HMMPfam | PF04564 | U-box | 3.1e-15 | 512-583 |
| HMMSmart | SM00504 | Modified | 2.4e-27 | 514-578 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | |||
| Gene3D | G3DSA:3.30.40.10 | no description | 8.1e-25 | 510-583 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:2.130.10.10 | no description | 3e-31 | 1186-1484 |
| IPR016024 | Armadillo-type fold | |||
| Molecular Function | GO:0005488 | binding | ||
| superfamily | SSF48371 | ARM | 2.3e-12 | 660-1153 |
| IPR017986 | WD40-repeat-containing domain | |||
| Molecular Function | GO:0005515 | protein binding | ||
| ProfileScan | PS50294 | WD_REPEATS_REGION | 10.258 | 1203-1283 1451-1485 |
| superfamily | SSF50978 | WD40 | 3e-31 | 1185-1485 |
| IPR019775 | WD40 repeat, conserved site | |||
| PatternScan | PS00678 | WD_REPEATS_1 | NA | 1219-1233 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 1113-1134 |
| HMMPanther | PTHR22849 | WDSAM1 | 1.9e-28 | 501-590 |
| HMMPanther | PTHR22849:SF0 | SUBFAMILY | 1.9e-28 | 501-590 |
| Seg | seg | seg | NA | 221-231 337-356 438-452 946-959 |
| superfamily | SSF57850 | RING/U-box | 2.4e-23 | 510-585 |
Lj5g3v1697430.1 nucl 8, chlo 2, cyto 2, vacu 1, cysk 1, chlo_mito 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj5g3v1697430.1 |