database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | Q1RSH3_MEDTR | 1052 | 92.4 | 95.9 | (tr|Q1RSH3) Chaperonin CPN60-like protein OS=Medicago truncatula GN=MTR_1g090140 PE=1 SV=1 |
TAIR_pep | AT3G23990.1 | 988 | 87.2 | 94.1 | | Symbols: HSP60, HSP60-3B | heat shock protein 60 | chr3:8669013-8672278 FORWARD LENGTH=577 |
Medicago | Medtr1g090140.1 | 1052 | 92.4 | 95.9 | | TCP-1/cpn60 chaperonin family protein | HC | chr1:40381503-40376286 | 20130731 |
Soybean | Glyma10g33680.1 | 1050 | 92.2 | 96.1 | |
LJGI | gnl|LJGI|TC69512 | 1146 | 97.5 | 97.5 | homologue to UniRef100_Q1RSH3 Cluster: GroEL-like chaperone, ATPase; n=1; Medicago truncatula|Rep: GroEL-like chaperone, ATPase - Medicago truncatula (Barrel medic), partial (37%) |
Lj5g3v1697130.1 | length: 578 aa. | |||
IPR001844 | Chaperonin Cpn60 | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Cellular Component | GO:0005737 | cytoplasm | ||
Biological Process | GO:0042026 | protein refolding | ||
FPrintScan | PR00298 | CHAPERONIN60 | 6.6e-71 | 58-84 114-141 299-322 381-406 429-450 |
HAMAP | MF_00600 | CH60 | 37.980 | 33-576 |
HMMTigr | TIGR02348 | GroEL: | 2.9e-229 | 34-559 |
IPR002423 | Chaperonin Cpn60/TCP-1 | |||
Molecular Function | GO:0005524 | ATP binding | ||
Biological Process | GO:0044267 | cellular protein metabolic process | ||
HMMPanther | PTHR11353 | CHAPERONIN | 0 | 1-576 |
HMMPfam | PF00118 | Cpn60_TCP1 | 1.6e-117 | 54-555 |
superfamily | SSF48592 | GroEL | 6.6e-71 | 37-553 |
IPR018370 | Chaperonin Cpn60, conserved site | |||
Molecular Function | GO:0005524 | ATP binding | ||
Cellular Component | GO:0005737 | cytoplasm | ||
Biological Process | GO:0006457 | protein folding | ||
PatternScan | PS00296 | CHAPERONINS_CPN60 | NA | 436-447 |
IPR027409 | GroEL-like apical domain | |||
Gene3D | G3DSA:3.50.7.10 | no description | 8e-93 | 220-398 |
superfamily | SSF52029 | GroEL | 5.7e-82 | 223-406 |
IPR027413 | GroEL-like equatorial domain | |||
Gene3D | G3DSA:1.10.560.10 | no description | 1.1e-43 | 34-219 399-550 |
no_ID | ||||
Coil | coil | coiled-coil | NA | 370-391 |
HMMPanther | PTHR11353:SF9 | CHAPERONIN-60KDA, | 0 | 1-576 |
Seg | seg | seg | NA | 486-498 566-576 |
superfamily | SSF54849 | GroEL-intermediate | 1.4e-19 | 168-229 |
Lj5g3v1697130.1 mito 12, chlo 2
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj5g3v1697130.1 |