Miyakogusa Predicted Gene

Lj5g3v1697110.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LCH7_SOYBN 983 82.1 88.7 (tr|I1LCH7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G55750.1 598 52.3 68.2 | Symbols: | BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) | chr1:20840449-20845135 REVERSE LENGTH=591
Medicago Medtr1g090110.1 927 78.3 84.8 | TFIIH basal transcription factor complex subunit, putative | HC | chr1:40358314-40346004 | 20130731
Soybean Glyma10g33660.1 983 82.1 88.7  
LJGI gnl|LJGI|TC74234 904 100.0 100.0 similar to UniRef100_A4Q530 Cluster: BSD; n=1; Medicago truncatula|Rep: BSD - Medicago truncatula (Barrel medic), partial (92%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1697110.2 length: 583 aa.
IPR005607 BSD
method AccNumber shortName E-value location
HMMPfam PF03909 BSD 1.3e-10 114-151
184-239
HMMSmart SM00751 domain 4e-06 102-160
185-237
ProfileScan PS50858 BSD 11.703 102-160
185-237
IPR027079 TFIIH subunit Tfb1/p62
Cellular Component GO:0000439 core TFIIH complex    
Biological Process GO:0006289 nucleotide-excision repair    
Biological Process GO:0006351 transcription, DNA-dependent    
HMMPanther PTHR12856 TRANSCRIPTION 1.7e-28 116-578
no_ID  
Coil coil coiled-coil NA 359-380
Seg seg seg NA 243-255
558-569
superfamily SSF140383 BSD 9.6e-07 109-156
155-239
superfamily SSF50729 PH 6.4e-10 1-109
Wolf-PSORT
Lj5g3v1697110.2	cyto 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1697110.2