Miyakogusa Predicted Gene

Lj5g3v1696930.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JFC8_SOYBN 453 63.2 75.2 (tr|I1JFC8) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT4G02920.2 185 34.2 52.5 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03340.1); Has 41 Blast hits to 41 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:1292816-1294670 FORWARD LENGTH=419

Medicago Medtr1g089980.1 435 60.7 71.7 | hypothetical protein | HC | chr1:40300374-40296904 | 20130731

Soybean Glyma02g16850.1 453 63.2 75.2

LJGI gnl|LJGI|TC61043 1344 99.4 99.4 similar to UniRef100_A7PU50 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v1696930.1 length: 372 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 265-286

Seg seg seg NA 37-46
261-275

Wolf-PSORT

Lj5g3v1696930.1 chlo 7, nucl 3, golg 2, nucl_plas 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v1696930.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JFC8_SOYBN	453	63.2	75.2	(tr\|I1JFC8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT4G02920.2	185	34.2	52.5	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03340.1); Has 41 Blast hits to 41 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr4:1292816-1294670 FORWARD LENGTH=419
Medicago	Medtr1g089980.1	435	60.7	71.7	\| hypothetical protein \| HC \| chr1:40300374-40296904 \| 20130731
Soybean	Glyma02g16850.1	453	63.2	75.2
LJGI	gnl\|LJGI\|TC61043	1344	99.4	99.4	similar to UniRef100_A7PU50 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)

no_ID
Lj5g3v1696930.1				length: 372 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	265-286
Seg	seg	seg	NA	37-46 261-275