Miyakogusa Predicted Gene

Lj5g3v1696900.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1JFC9_SOYBN 580 84.1 90.6 (tr|I1JFC9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G63900.1 498 70.1 81.4 | Symbols: DAL1 | E3 Ubiquitin ligase family protein | chr1:23717056-23719086 FORWARD LENGTH=343
Medicago Medtr1g089900.1 545 76.2 85.0 | E3 ubiquitin ligase-like protein | HC | chr1:40259713-40254728 | 20130731
Soybean Glyma02g16860.1 580 84.1 90.6  
LJGI gnl|LJGI|TC81599 593 100.0 100.0 similar to UniRef100_A7PU46 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1696900.1 length: 340 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50089 ZF_RING_2 11.412 293-328
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 9e-07 290-334
IPR022170 E3 Ubiquitin ligase
Molecular Function GO:0016881 acid-amino acid ligase activity    
HMMPfam PF12483 GIDE 9.7e-48 84-233
no_ID  
HMMPanther PTHR12183 UNCHARACTERIZED 1.2e-52 11-339
HMMPfam PF13920 zf-C3HC4_3 1.3e-13 291-334
Seg seg seg NA 8-19
260-264
superfamily SSF57850 RING/U-box 2.7e-08 285-340
Wolf-PSORT
Lj5g3v1696900.1	chlo 9, extr 2, nucl 1, cyto 1, plas 1, cyto_nucl 1, nucl_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1696900.1