Miyakogusa Predicted Gene

Lj5g3v1695660.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K8G2_SOYBN 866 57.4 67.4 (tr|K7K8G2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G03000.2 476 38.9 55.2 | Symbols: | RING/U-box superfamily protein | chr4:1324602-1327348 FORWARD LENGTH=814
Medicago Medtr1g089740.3 452 50.2 64.0 | E3 ubiquitin-protein ligase RF298-like protein, putative | HC | chr1:40159583-40154626 | 20130731
Soybean Glyma02g16940.1 896 58.7 69.0  
LJGI gnl|LJGI|DC600042 212 98.3 98.3 similar to UniRef100_UPI00015A807A Cluster: VIP36-like protein precursor (Lectin, mannose-binding 2-like) (LMAN2- like protein).; n=1; Danio rerio|Rep: VIP36-like protein precursor (Lectin, mannose-binding 2-like) (LMAN2- like protein). - Danio rerio, partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1695660.1 length: 828 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50089 ZF_RING_2 9.819 774-814
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 4.5e-07 763-820
no_ID  
Coil coil coiled-coil NA 504-567
609-644
665-686
687-722
HMMPanther PTHR10044 INHIBITOR 5.4e-12 769-823
HMMPfam PF13920 zf-C3HC4_3 3.9e-11 771-819
Seg seg seg NA 570-585
616-631
703-714
superfamily SSF57850 RING/U-box 1.5e-09 766-826
Wolf-PSORT
Lj5g3v1695660.1	E.R. 4, nucl 3, E.R._vacu 3, vacu 2, golg 2, nucl_plas 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1695660.1