Miyakogusa Predicted Gene

Lj5g3v1692550.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6TA39_SOYBN 667 90.5 95.7 (tr|C6TA39) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT4G03020.2 578 79.0 90.2 | Symbols: | transducin family protein / WD-40 repeat family protein | chr4:1331704-1334472 REVERSE LENGTH=493
Medicago Medtr1g089290.2 655 89.9 94.5 | transducin/WD-like repeat-protein | HC | chr1:40076312-40081778 | 20130731
Soybean Glyma10g02800.1 667 90.5 95.7  
LJGI gnl|LJGI|TC78209 1774 99.3 99.3 similar to UniRef100_O24467 Cluster: LEC14B homolog; n=1; Prunus armeniaca|Rep: LEC14B homolog - Prunus armeniaca (Apricot), partial (63%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1692550.2 length: 346 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 3.8e-09 144-176
185-222
310-345
HMMSmart SM00320 WD40 1.8e-07 39-75
81-133
137-176
183-222
259-304
307-346
ProfileScan PS50082 WD_REPEATS_2 11.879 101-142
143-176
190-231
314-346
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 3.7e-53 9-346
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 25.839 101-346
superfamily SSF50978 WD40 8.7e-55 2-346
IPR020472 G-protein beta WD-40 repeat
FPrintScan PR00320 GPROTEINBRPT 2.6e-05 163-177
209-223
333-346
no_ID  
HMMPanther PTHR19847 WD40 6e-227 1-346
HMMPanther PTHR19847:SF3 WD-REPEAT 6e-227 1-346
Wolf-PSORT
Lj5g3v1692550.2	chlo 7, cyto 3, nucl 2, vacu 1, cysk 1, nucl_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1692550.2