Miyakogusa Predicted Gene

Lj5g3v1681450.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SKM5_LOTJA 498 100.0 100.0 (tr|I3SKM5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT5G17510.1 351 71.7 84.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:5770518-5772343 REVERSE LENGTH=369

Medicago Medtr0004s0240.1 432 86.6 90.5 | hypothetical protein | HC | scaffold0004:102002-96075 | 20130731

Soybean Glyma09g35700.1 439 85.3 90.4

LJGI gnl|LJGI|TC73901 1417 99.7 99.7 similar to UniRef100_A7PB20 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (94%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v1681450.1 length: 240 aa.

no_ID

method AccNumber shortName E-value location

HMMPanther PTHR15572 GLIOMA 7.5e-70 3-231

Wolf-PSORT

Lj5g3v1681450.1 nucl 6, mito 5, cyto 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v1681450.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SKM5_LOTJA	498	100.0	100.0	(tr\|I3SKM5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT5G17510.1	351	71.7	84.1	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). \| chr5:5770518-5772343 REVERSE LENGTH=369
Medicago	Medtr0004s0240.1	432	86.6	90.5	\| hypothetical protein \| HC \| scaffold0004:102002-96075 \| 20130731
Soybean	Glyma09g35700.1	439	85.3	90.4
LJGI	gnl\|LJGI\|TC73901	1417	99.7	99.7	similar to UniRef100_A7PB20 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (94%)

no_ID
Lj5g3v1681450.1				length: 240 aa.
method	AccNumber	shortName	E-value	location
HMMPanther	PTHR15572	GLIOMA	7.5e-70	3-231