Miyakogusa Predicted Gene

Lj5g3v1669330.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JFG2_SOYBN 1005 85.1 89.8 (tr|I1JFG2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G62980.1 882 74.1 86.7 | Symbols: TIR1 | F-box/RNI-like superfamily protein | chr3:23273479-23276181 REVERSE LENGTH=594
Medicago Medtr1g088950.1 1006 84.1 90.2 | transport inhibitor response-like protein | HC | chr1:39907710-39904364 | 20130731
Soybean Glyma02g17170.1 1005 85.1 89.8  
LJGI gnl|LJGI|TC70751 1957 100.0 100.0 similar to UniRef100_A7PTZ1 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (71%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1669330.1 length: 556 aa.
IPR006553 Leucine-rich repeat, cysteine-containing subtype
method AccNumber shortName E-value location
HMMSmart SM00367 Leucine-rich 40 76-100
101-126
127-164
343-367
403-426
452-476
no_ID  
Gene3D G3DSA:3.80.10.10 no description 8.8e-13 7-211
228-380
394-505
HMMPanther PTHR23125 F-BOX/LEUCINE 0 7-555
HMMPanther PTHR23125:SF17 GRR1-RELATED, 0 7-555
superfamily SSF52047 RNI-like 8.2e-32 25-506
Wolf-PSORT
Lj5g3v1669330.1	chlo 7, nucl 4, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1669330.1