Miyakogusa Predicted Gene

Lj5g3v1667300.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S5R3_LOTJA 758 95.6 95.9 (tr|I3S5R3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G26520.1 515 70.0 80.4 | Symbols: | Cobalamin biosynthesis CobW-like protein | chr1:9163448-9165594 REVERSE LENGTH=374
Medicago Medtr5g044050.1 638 85.5 91.0 | cobalamin biosynthesis protein | HC | chr5:19367945-19374070 | 20130731
Soybean Glyma01g07010.1 613 84.7 89.6  
LJGI gnl|LJGI|TC63091 2325 100.0 100.0 similar to UniRef100_A7P2I5 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (80%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1667300.1 length: 390 aa.
IPR003495 CobW/HypB/UreG domain
method AccNumber shortName E-value location
HMMPfam PF02492 cobW 4e-52 56-246
IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal
Gene3D G3DSA:3.30.1220.10 no description 1.1e-27 283-388
HMMPfam PF07683 CobW_C 5e-17 293-388
HMMSmart SM00833 Cobalamin 0.00014 292-388
superfamily SSF90002 Hypothetical 1.1e-22 292-389
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.5e-34 52-286
no_ID  
Gene3D G3DSA:3.40.50.300 no description 9.8e-71 53-265
HMMPanther PTHR13748 COBW-RELATED 9.6e-151 27-389
HMMPanther PTHR13748:SF17 COBW 9.6e-151 27-389
Seg seg seg NA 272-287
Wolf-PSORT
Lj5g3v1667300.1	nucl 5, cyto 4, mito 3, nucl_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1667300.1