database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | K7MV92_SOYBN | 157 | 30.0 | 51.2 | (tr|K7MV92) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
TAIR_pep | --No_Hits-- | ||||
Medicago | Medtr5g065250.1 | 120 | 30.7 | 46.7 | | RNA recognition motif, a.k.a. RRM, RBD protein | LC | chr5:27420597-27418392 | 20130731 |
Soybean | Glyma09g10240.1 | 145 | 27.7 | 48.3 | |
LJGI | --No_Hits-- |
Lj5g3v1666250.1 | length: 369 aa. | |||
IPR000504 | RNA recognition motif domain | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0003676 | nucleic acid binding | ||
HMMSmart | SM00360 | RNA | 5.4e-06 | 8-80 |
ProfileScan | PS50102 | RRM | 10.838 | 7-84 |
IPR012677 | Nucleotide-binding, alpha-beta plait | |||
Molecular Function | GO:0000166 | nucleotide binding | ||
Gene3D | G3DSA:3.30.70.330 | no description | 7.2e-09 | 10-83 |
IPR025558 | Domain of unknown function DUF4283 | |||
HMMPfam | PF14111 | DUF4283 | 1.3e-11 | 174-301 |
no_ID | ||||
HMMPfam | PF13893 | RRM_5 | 2.6e-06 | 25-80 |
Seg | seg | seg | NA | 7-22 159-170 |
superfamily | SSF54928 | RNA-binding | 1.2e-11 | 7-83 |
Lj5g3v1666250.1 chlo 4, nucl 4, cyto 4, cyto_nucl 4
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj5g3v1666250.1 |