database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | I1JFH1_SOYBN | 565 | 81.6 | 85.9 | (tr|I1JFH1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
TAIR_pep | AT2G47850.3 | 445 | 65.2 | 74.4 | | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr2:19595953-19598119 FORWARD LENGTH=468 |
Medicago | Medtr1g088875.2 | 538 | 79.8 | 84.4 | | zinc finger C-x8-C-x5-C-x3-H type protein | HC | chr1:39809788-39813799 | 20130731 |
Soybean | Glyma02g17260.1 | 565 | 81.6 | 85.9 | |
LJGI | gnl|LJGI|TC73416 | 1203 | 97.0 | 97.0 | similar to UniRef100_A7PTX9 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (37%) |
Lj5g3v1665190.2 | length: 350 aa. | |||
IPR000571 | Zinc finger, CCCH-type | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0003676 | nucleic acid binding | ||
Molecular Function | GO:0008270 | zinc ion binding | ||
Gene3D | G3DSA:4.10.1000.10 | no description | 0.00023 | 59-80 103-125 |
HMMPfam | PF00642 | zf-CCCH | 5e-09 | 55-80 101-125 146-171 302-328 |
HMMSmart | SM00356 | zinc | 4e-05 | 53-80 98-125 144-171 301-328 |
ProfileScan | PS50103 | ZF_C3H1 | 14.709 | 53-81 98-126 144-172 301-329 |
no_ID | ||||
HMMPanther | PTHR12506 | PROTEIN | 3e-138 | 12-347 |
HMMPanther | PTHR12506:SF11 | ZINC | 3e-138 | 12-347 |
Seg | seg | seg | NA | 41-47 82-91 280-293 |
superfamily | SSF90229 | CCCH | 1.5e-05 | 48-87 139-178 296-335 93-132 |
Lj5g3v1665190.2 nucl 7, pero 5, chlo 1, cyto 1
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj5g3v1665190.2 |