Miyakogusa Predicted Gene

Lj5g3v1665190.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JFH1_SOYBN 780 82.4 86.8 (tr|I1JFH1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G47850.3 558 63.1 73.8 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr2:19595953-19598119 FORWARD LENGTH=468
Medicago Medtr1g088875.2 545 79.1 84.0 | zinc finger C-x8-C-x5-C-x3-H type protein | HC | chr1:39809788-39813799 | 20130731
Soybean Glyma02g17260.1 780 82.4 86.8  
LJGI gnl|LJGI|TC73416 1203 97.0 97.0 similar to UniRef100_A7PTX9 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (37%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1665190.1 length: 476 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1000.10 no description 0.00014 103-125
349-371
HMMPfam PF00642 zf-CCCH 1.9e-09 55-80
101-125
146-171
302-328
347-371
HMMSmart SM00356 zinc 1e-06 53-80
98-125
144-171
301-328
345-372
ProfileScan PS50103 ZF_C3H1 15.338 53-81
98-126
144-172
301-329
345-373
no_ID  
HMMPanther PTHR12506 PROTEIN 1.7e-167 12-476
HMMPanther PTHR12506:SF11 ZINC 1.7e-167 12-476
Seg seg seg NA 41-47
82-91
280-293
superfamily SSF90229 CCCH 1.5e-05 340-379
48-87
139-178
296-335
93-132
Wolf-PSORT
Lj5g3v1665190.1	nucl 10, pero 2, chlo 1, cyto 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1665190.1