Miyakogusa Predicted Gene

Lj5g3v1630010.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1L7W1_SOYBN 2499 81.9 87.5 (tr|I1L7W1) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT2G47800.1 2041 66.2 78.1 | Symbols: ATMRP4, EST3, MRP4, ABCC4 | multidrug resistance-associated protein 4 | chr2:19574944-19580383 FORWARD LENGTH=1516
Medicago Medtr1g088680.1 2402 79.4 85.6 | multidrug resistance protein ABC transporter family protein | HC | chr1:39668018-39660482 | 20130731
Soybean Glyma10g02370.1 2499 81.9 87.5  
LJGI gnl|LJGI|GO026257 779 94.9 94.9 similar to UniRef100_A7Q0B2 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1630010.1 length: 1518 aa.
IPR001140 ABC transporter, transmembrane domain
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00664 ABC_membrane 3.8e-30 339-605
967-1224
IPR003439 ABC transporter-like
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 1.8e-18 694-802
1317-1441
ProfileScan PS50893 ABC_TRANSPORTER_2 18.301 652-875
1276-1510
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 2.1e-10 679-852
1302-1486
IPR011527 ABC transporter, transmembrane domain, type 1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
superfamily SSF90123 ABC 1.9e-34 932-1266
315-627
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 777-791
IPR017940 ABC transporter, integral membrane type 1
ProfileScan PS50929 ABC_TM1F 33.744 338-618
961-1239
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.8e-50 1255-1496
652-861
no_ID  
Gene3D G3DSA:1.20.1560.10 no description 3.3e-57 329-631
956-1254
Gene3D G3DSA:3.40.50.300 no description 2.6e-65 652-878
1275-1501
HMMPanther PTHR24223 FAMILY 0 67-1518
HMMPanther PTHR24223:SF106GTP BINDING 0 67-1518
Seg seg seg NA 2-19
44-58
60-75
81-96
100-119
589-599
1331-1341
Wolf-PSORT
Lj5g3v1630010.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1630010.1