Miyakogusa Predicted Gene

Lj5g3v1615790.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LGW7_SOYBN 930 80.1 86.4 (tr|K7LGW7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G02390.1 730 63.1 73.8 | Symbols: APP, PARP1, ATPARP1, PP | poly(ADP-ribose) polymerase | chr4:1050104-1053960 FORWARD LENGTH=637
Medicago Medtr1g088375.1 934 75.8 83.8 | poly(ADP-ribose) polymerase domain protein | HC | chr1:39503017-39512456 | 20130731
Soybean Glyma10g02220.1 932 80.1 86.4  
LJGI gnl|LJGI|FS357178 959 100.0 100.0 similar to UniRef100_A7Q0E8 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1615790.1 length: 583 aa.
IPR003034 SAP domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Gene3D G3DSA:1.10.720.30 no description 8.2e-08 4-43
HMMPfam PF02037 SAP 1.9e-07 6-34
HMMSmart SM00513 Putative 0.00011 2-36
ProfileScan PS50800 SAP 10.785 2-36
IPR004102 Poly(ADP-ribose) polymerase, regulatory domain
Molecular Function GO:0003950 NAD+ ADP-ribosyltransferase activity    
Biological Process GO:0006471 protein ADP-ribosylation    
Gene3D G3DSA:1.20.142.10 no description 1.2e-49 199-368
HMMPfam PF02877 PARP_reg 2.1e-44 233-366
ProfileScan PS51060 PARP_ALPHA_HD 38.705 233-351
superfamily SSF47587 Domain 1.5e-40 233-369
IPR008893 WGR domain
Gene3D G3DSA:2.20.140.10 no description 2.7e-09 120-198
HMMPfam PF05406 WGR 3.4e-24 114-196
HMMSmart SM00773 Proposed 6.6e-36 117-197
superfamily SSF142921 WGR 5.7e-41 80-208
IPR012317 Poly(ADP-ribose) polymerase, catalytic domain
Molecular Function GO:0003950 NAD+ ADP-ribosyltransferase activity    
Gene3D G3DSA:3.90.228.10 no description 1.2e-75 369-581
HMMPfam PF00644 PARP 1.5e-72 368-579
ProfileScan PS51059 PARP_CATALYTIC 96.336 359-583
no_ID  
Coil coil coiled-coil NA 62-83
HMMPanther PTHR15447 POLY 7.1e-250 43-583
Seg seg seg NA 79-94
superfamily SSF56399 ADP-ribosylation 2.3e-71 368-583
Wolf-PSORT
Lj5g3v1615790.1	cyto 11, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1615790.1