Miyakogusa Predicted Gene
- Lj5g3v1605670.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T2W4_LOTJA |
267 |
99.2 |
99.2 |
(tr|I3T2W4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G02816.1 |
166 |
58.5 |
76.9 |
| Symbols: | Protein of unknown function, DUF538 | chr1:621637-622137 FORWARD LENGTH=166 |
| Medicago |
Medtr1g088250.1 |
208 |
75.6 |
88.5 |
| DUF538 family protein | HC | chr1:39482841-39484081 | 20130731 |
| Soybean |
Glyma10g02190.1 |
204 |
75.6 |
86.3 |
|
| LJGI |
gnl|LJGI|TC64708 |
848 |
100.0 |
100.0 |
weakly similar to UniRef100_A7Q0F2 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (75%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v1605670.1 |
length: 165 aa. |
| IPR007493 |
Protein of unknown function DUF538 |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:2.30.240.10 |
no description |
1.1e-43 |
12-146 |
| HMMPfam |
PF04398 |
DUF538 |
1.7e-36 |
27-135 |
| superfamily |
SSF141562 |
At5g01610-like |
5.9e-43 |
1-147 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
3-33 |
- Wolf-PSORT
Lj5g3v1605670.1 extr 9, mito 2, chlo 1, nucl 1, vacu 1, cyto_mito 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v1605670.1 |
|