Miyakogusa Predicted Gene

Lj5g3v1602360.3

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JBJ0_SOYBN 1404 78.7 84.6 (tr|I1JBJ0) Uncharacterized protein OS=Glycine max PE=3 SV=2

TAIR_pep AT2G47500.1 972 59.1 69.2 | Symbols: | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain | chr2:19493247-19497882 FORWARD LENGTH=983

Medicago Medtr1g087880.1 1368 76.8 83.2 | P-loop nucleoside triphosphate hydrolase superfamily protein | HC | chr1:39338160-39344460 | 20130731

Soybean Glyma02g01900.1 1321 75.1 80.7

LJGI gnl|LJGI|TC68916 801 99.3 99.3 weakly similar to UniRef100_A4GU96 Cluster: Kinesin-related protein; n=1; Gossypium hirsutum|Rep: Kinesin-related protein - Gossypium hirsutum (Upland cotton) (Gossypium mexicanum), partial (9%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v1602360.3 length: 879 aa.

IPR001752 Kinesin, motor domain

method AccNumber shortName E-value location

Molecular Function GO:0003777 microtubule motor activity

Molecular Function GO:0005524 ATP binding

Cellular Component GO:0005875 microtubule associated complex

Biological Process GO:0007018 microtubule-based movement

FPrintScan PR00380 KINESINHEAVY 2.3e-39 318-339
440-457
471-489
520-541

Gene3D G3DSA:3.40.850.10 no description 1.4e-122 243-574

HMMPfam PF00225 Kinesin 1.5e-106 251-569

HMMSmart SM00129 Kinesin 6.8e-167 243-578

ProfileScan PS50067 KINESIN_MOTOR_DOMAIN2 50.093 242-501

IPR027417 P-loop containing nucleoside triphosphate hydrolase

superfamily SSF52540 P-loop 4.3e-118 200-570

no_ID

Coil coil coiled-coil NA 577-605

HMMPanther PTHR24115 FAMILY 9e-289 125-731

HMMPanther PTHR24115:SF184SUBFAMILY NOT 9e-289 125-731

Seg seg seg NA 602-614
782-798
839-850

Wolf-PSORT

Lj5g3v1602360.3 nucl 14

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v1602360.3

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JBJ0_SOYBN	1404	78.7	84.6	(tr\|I1JBJ0) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep	AT2G47500.1	972	59.1	69.2	\| Symbols: \| P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain \| chr2:19493247-19497882 FORWARD LENGTH=983
Medicago	Medtr1g087880.1	1368	76.8	83.2	\| P-loop nucleoside triphosphate hydrolase superfamily protein \| HC \| chr1:39338160-39344460 \| 20130731
Soybean	Glyma02g01900.1	1321	75.1	80.7
LJGI	gnl\|LJGI\|TC68916	801	99.3	99.3	weakly similar to UniRef100_A4GU96 Cluster: Kinesin-related protein; n=1; Gossypium hirsutum\|Rep: Kinesin-related protein - Gossypium hirsutum (Upland cotton) (Gossypium mexicanum), partial (9%)

IPR001752	Kinesin, motor domain
Lj5g3v1602360.3				length: 879 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0003777	microtubule motor activity
Molecular Function	GO:0005524	ATP binding
Cellular Component	GO:0005875	microtubule associated complex
Biological Process	GO:0007018	microtubule-based movement
FPrintScan	PR00380	KINESINHEAVY	2.3e-39	318-339 440-457 471-489 520-541
Gene3D	G3DSA:3.40.850.10	no description	1.4e-122	243-574
HMMPfam	PF00225	Kinesin	1.5e-106	251-569
HMMSmart	SM00129	Kinesin	6.8e-167	243-578
ProfileScan	PS50067	KINESIN_MOTOR_DOMAIN2	50.093	242-501
IPR027417	P-loop containing nucleoside triphosphate hydrolase
superfamily	SSF52540	P-loop	4.3e-118	200-570
no_ID
Coil	coil	coiled-coil	NA	577-605
HMMPanther	PTHR24115	FAMILY	9e-289	125-731
HMMPanther	PTHR24115:SF184SUBFAMILY	NOT	9e-289	125-731
Seg	seg	seg	NA	602-614 782-798 839-850