Miyakogusa Predicted Gene

Lj5g3v1602360.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JBJ0_SOYBN 1050 78.1 83.2 (tr|I1JBJ0) Uncharacterized protein OS=Glycine max PE=3 SV=2

TAIR_pep AT2G47500.1 790 62.2 70.4 | Symbols: | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain | chr2:19493247-19497882 FORWARD LENGTH=983

Medicago Medtr1g087880.1 1012 75.8 80.9 | P-loop nucleoside triphosphate hydrolase superfamily protein | HC | chr1:39338160-39344460 | 20130731

Soybean Glyma02g01900.1 1026 76.9 81.8

LJGI gnl|LJGI|TC68916 801 99.3 99.3 weakly similar to UniRef100_A4GU96 Cluster: Kinesin-related protein; n=1; Gossypium hirsutum|Rep: Kinesin-related protein - Gossypium hirsutum (Upland cotton) (Gossypium mexicanum), partial (9%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v1602360.1 length: 668 aa.

IPR001752 Kinesin, motor domain

method AccNumber shortName E-value location

Molecular Function GO:0003777 microtubule motor activity

Molecular Function GO:0005524 ATP binding

Cellular Component GO:0005875 microtubule associated complex

Biological Process GO:0007018 microtubule-based movement

FPrintScan PR00380 KINESINHEAVY 8.1e-40 107-128
229-246
260-278
309-330

Gene3D G3DSA:3.40.850.10 no description 2.3e-122 33-363

HMMPfam PF00225 Kinesin 7.9e-107 40-358

HMMSmart SM00129 Kinesin 2.2e-165 32-367

ProfileScan PS50067 KINESIN_MOTOR_DOMAIN2 49.828 31-290

IPR027417 P-loop containing nucleoside triphosphate hydrolase

superfamily SSF52540 P-loop 7.2e-118 34-402

no_ID

Coil coil coiled-coil NA 13-34
366-394

HMMPanther PTHR24115 FAMILY 1.9e-284 4-520

HMMPanther PTHR24115:SF184SUBFAMILY NOT 1.9e-284 4-520

Seg seg seg NA 391-403
571-587
628-639

Wolf-PSORT

Lj5g3v1602360.1 nucl 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v1602360.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JBJ0_SOYBN	1050	78.1	83.2	(tr\|I1JBJ0) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep	AT2G47500.1	790	62.2	70.4	\| Symbols: \| P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain \| chr2:19493247-19497882 FORWARD LENGTH=983
Medicago	Medtr1g087880.1	1012	75.8	80.9	\| P-loop nucleoside triphosphate hydrolase superfamily protein \| HC \| chr1:39338160-39344460 \| 20130731
Soybean	Glyma02g01900.1	1026	76.9	81.8
LJGI	gnl\|LJGI\|TC68916	801	99.3	99.3	weakly similar to UniRef100_A4GU96 Cluster: Kinesin-related protein; n=1; Gossypium hirsutum\|Rep: Kinesin-related protein - Gossypium hirsutum (Upland cotton) (Gossypium mexicanum), partial (9%)

IPR001752	Kinesin, motor domain
Lj5g3v1602360.1				length: 668 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0003777	microtubule motor activity
Molecular Function	GO:0005524	ATP binding
Cellular Component	GO:0005875	microtubule associated complex
Biological Process	GO:0007018	microtubule-based movement
FPrintScan	PR00380	KINESINHEAVY	8.1e-40	107-128 229-246 260-278 309-330
Gene3D	G3DSA:3.40.850.10	no description	2.3e-122	33-363
HMMPfam	PF00225	Kinesin	7.9e-107	40-358
HMMSmart	SM00129	Kinesin	2.2e-165	32-367
ProfileScan	PS50067	KINESIN_MOTOR_DOMAIN2	49.828	31-290
IPR027417	P-loop containing nucleoside triphosphate hydrolase
superfamily	SSF52540	P-loop	7.2e-118	34-402
no_ID
Coil	coil	coiled-coil	NA	13-34 366-394
HMMPanther	PTHR24115	FAMILY	1.9e-284	4-520
HMMPanther	PTHR24115:SF184SUBFAMILY	NOT	1.9e-284	4-520
Seg	seg	seg	NA	391-403 571-587 628-639