- Results of Blast2 searches (The best-hits are tabulated.):
- A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1601910.1 |
length: 393 aa. |
IPR001810 |
F-box domain, cyclin-like |
method |
AccNumber |
shortName |
E-value |
location |
Molecular Function |
GO:0005515 |
protein binding |
|
|
HMMSmart |
SM00256 |
A |
1.3e-07 |
31-71 |
ProfileScan |
PS50181 |
FBOX |
10.372 |
25-70 |
superfamily |
SSF81383 |
F-box |
1.7e-16 |
18-99 |
IPR017451 |
F-box associated interaction domain |
HMMTigr |
TIGR01640 |
F_box_assoc_1: |
9.7e-22 |
134-362 |
no_ID |
|
Gene3D |
G3DSA:1.20.1280.50 |
no description |
2.4e-11 |
26-67 |
HMMPanther |
PTHR32133 |
FAMILY |
6.2e-13 |
28-267 |
HMMPanther |
PTHR32133:SF0 |
SUBFAMILY |
6.2e-13 |
28-267 |
HMMPfam |
PF12937 |
F-box-like |
7.9e-08 |
30-66 |
Seg |
seg |
seg |
NA |
17-29 |
- Wolf-PSORT
Lj5g3v1601910.1 nucl 8, cyto 2, mito 2, plas 1, cysk 1, chlo_mito 1, cyto_mito 1, cyto_pero 1, cysk_plas 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj5g3v1601910.1 |
|