Miyakogusa Predicted Gene

Lj5g3v1601860.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3T3B4_LOTJA 325 88.3 88.3 (tr|I3T3B4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT5G38700.1 120 43.5 58.3 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:15489690-15490238 FORWARD LENGTH=182

Medicago Medtr1g087710.1 233 66.7 75.7 | DUF761 domain protein | HC | chr1:39240221-39239203 | 20130731

Soybean Glyma02g01780.1 226 59.8 67.5

LJGI gnl|LJGI|TC58430 1076 100.0 100.0 similar to UniRef100_A7Q0J6 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (68%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v1601860.1 length: 180 aa.

IPR008480 Protein of unknown function DUF761, plant

method AccNumber shortName E-value location

HMMPfam PF05553 DUF761 1.4e-14 142-176

no_ID

Seg seg seg NA 97-108
135-143

Wolf-PSORT

Lj5g3v1601860.1 chlo 7, mito 5, nucl 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v1601860.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3T3B4_LOTJA	325	88.3	88.3	(tr\|I3T3B4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT5G38700.1	120	43.5	58.3	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr5:15489690-15490238 FORWARD LENGTH=182
Medicago	Medtr1g087710.1	233	66.7	75.7	\| DUF761 domain protein \| HC \| chr1:39240221-39239203 \| 20130731
Soybean	Glyma02g01780.1	226	59.8	67.5
LJGI	gnl\|LJGI\|TC58430	1076	100.0	100.0	similar to UniRef100_A7Q0J6 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (68%)

IPR008480	Protein of unknown function DUF761, plant
Lj5g3v1601860.1				length: 180 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF05553	DUF761	1.4e-14	142-176
no_ID
Seg	seg	seg	NA	97-108 135-143