| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7IDS4_MEDTR | 1521 | 63.4 | 72.0 | (tr|G7IDS4) BRCT domain-containing protein OS=Medicago truncatula GN=MTR_1g087290 PE=4 SV=1 |
| TAIR_pep | AT4G02110.1 | 398 | 60.5 | 76.3 | | Symbols: | transcription coactivators | chr4:935191-940191 FORWARD LENGTH=1329 |
| Medicago | Medtr1g087290.2 | 1523 | 63.4 | 72.0 | | DNA replication regulator dpb11, putative | HC | chr1:39126643-39118680 | 20130731 |
| Soybean | Glyma10g01740.1 | 1451 | 59.3 | 65.9 | |
| LJGI | gnl|LJGI|BP031190 | 274 | 92.8 | 92.8 | similar to UniRef100_A7Q0L1 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (3%) |
| Lj5g3v1600740.1 | length: 1226 aa. | |||
| IPR001357 | BRCT domain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Gene3D | G3DSA:3.40.50.10190 | no description | 9.4e-23 | 6-91 110-199 909-1012 |
| HMMPfam | PF00533 | BRCT | 9.1e-09 | 913-977 |
| HMMPfam | PF12738 | PTCB-BRCT | 9.6e-22 | 111-175 |
| HMMSmart | SM00292 | breast | 0.26 | 8-86 99-183 901-981 1019-1106 |
| ProfileScan | PS50172 | BRCT | 10.307 | 6-96 111-193 899-991 |
| superfamily | SSF52113 | BRCT | 0.005 | 111-199 905-1015 6-100 1019-1101 |
| IPR001965 | Zinc finger, PHD-type | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMSmart | SM00249 | PHD | 1.7e-05 | 1151-1203 |
| IPR011011 | Zinc finger, FYVE/PHD-type | |||
| superfamily | SSF57903 | FYVE/PHD | 9.6e-14 | 1134-1221 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | |||
| Gene3D | G3DSA:3.30.40.10 | no description | 4.1e-13 | 1136-1215 |
| IPR019787 | Zinc finger, PHD-finger | |||
| Molecular Function | GO:0005515 | protein binding | ||
| HMMPfam | PF00628 | PHD | 4.7e-08 | 1152-1204 |
| ProfileScan | PS50016 | ZF_PHD_2 | 8.894 | 1149-1205 |
| no_ID | ||||
| HMMPanther | PTHR13561 | DNA | 1.6e-224 | 6-1151 |
| HMMPanther | PTHR13561:SF5 | DNA | 1.6e-224 | 6-1151 |
| Seg | seg | seg | NA | 202-215 515-530 585-595 1213-1226 |
Lj5g3v1600740.1 nucl 5, chlo 4, mito 1.5, cyto_mito 1.5, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj5g3v1600740.1 |