Miyakogusa Predicted Gene

Lj5g3v1598560.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LGU8_SOYBN 561 84.1 87.5 (tr|K7LGU8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G47410.1 448 64.3 73.7 | Symbols: | WD40/YVTN repeat-like-containing domain;Bromodomain | chr2:19449133-19456991 FORWARD LENGTH=1520
Medicago Medtr1g087120.1 530 74.5 79.9 | WD40/YVTN repeat containing domain; bromodomain protein | HC | chr1:39005297-39023503 | 20130731
Soybean Glyma10g01670.1 559 84.1 87.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1598560.2 length: 348 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 0.0014 29-67
HMMSmart SM00320 WD40 0.00019 27-67
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 1.2e-17 2-116
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 13.448 1-76
IPR019775 WD40 repeat, conserved site
PatternScan PS00678 WD_REPEATS_1 NA 11-25
54-68
no_ID  
HMMPanther PTHR16266 WD 4.4e-188 1-348
HMMPanther PTHR16266:SF16 BROMODOMAIN-CONTAINING 4.4e-188 1-348
Seg seg seg NA 264-286
323-342
superfamily SSF50960 TolB, 2.1e-18 2-112
Wolf-PSORT
Lj5g3v1598560.2	nucl 12.5, cyto_nucl 7
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1598560.2