Miyakogusa Predicted Gene

Lj5g3v1598550.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JBG5_SOYBN 833 81.9 88.7 (tr|I1JBG5) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G47410.1 681 70.1 80.6 | Symbols: | WD40/YVTN repeat-like-containing domain;Bromodomain | chr2:19449133-19456991 FORWARD LENGTH=1520
Medicago Medtr1g087120.1 812 76.9 84.9 | WD40/YVTN repeat containing domain; bromodomain protein | HC | chr1:39005297-39023503 | 20130731
Soybean Glyma02g01620.1 832 81.9 88.7  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1598550.1 length: 510 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 0.1 237-272
278-313
320-359
394-425
444-501
HMMSmart SM00320 WD40 3 233-272
275-314
317-359
386-425
434-502
ProfileScan PS50082 WD_REPEATS_2 9.907 240-281
282-323
324-368
393-425
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 1.1e-50 232-506
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 32.562 240-434
superfamily SSF50978 WD40 1.1e-43 232-501
IPR019775 WD40 repeat, conserved site
PatternScan PS00678 WD_REPEATS_1 NA 346-360
IPR020472 G-protein beta WD-40 repeat
FPrintScan PR00320 GPROTEINBRPT 7e-06 259-273
301-315
346-360
no_ID  
HMMPanther PTHR16266 WD 7e-269 37-507
HMMPanther PTHR16266:SF16 BROMODOMAIN-CONTAINING 7e-269 37-507
Seg seg seg NA 8-24
293-306
Wolf-PSORT
Lj5g3v1598550.1	chlo 7, nucl 2, cyto 2, mito 2, cyto_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1598550.1