| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7ICW4_MEDTR | 595 | 61.3 | 76.2 | (tr|G7ICW4) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_1g086820 PE=4 SV=1 |
| TAIR_pep | AT1G02370.1 | 354 | 44.7 | 63.0 | | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:474516-476383 FORWARD LENGTH=537 |
| Medicago | Medtr1g086820.1 | 594 | 61.3 | 76.2 | | PPR containing plant protein | HC | chr1:38878473-38875899 | 20130731 |
| Soybean | Glyma10g01500.1 | 594 | 61.2 | 76.6 | |
| LJGI | gnl|LJGI|FS353651 | 728 | 92.0 | 92.0 | weakly similar to UniRef100_Q9FZ24 Cluster: T6A9.6 protein; n=1; Arabidopsis thaliana|Rep: T6A9.6 protein - Arabidopsis thaliana (Mouse-ear cress), partial (16%) |
| Lj5g3v1598340.1 | length: 483 aa. | |||
| IPR002885 | Pentatricopeptide repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF01535 | PPR | 0.31 | 132-161 167-196 238-263 273-298 306-333 |
| HMMTigr | TIGR00756 | PPR: | 0.00035 | 132-162 167-199 |
| ProfileScan | PS51375 | PPR | 7.158 | 62-96 130-164 167-198 235-265 199-229 270-304 339-373 |
| IPR011990 | Tetratricopeptide-like helical | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.25.40.10 | no description | 7.5e-11 | 129-331 |
| no_ID | ||||
| HMMPanther | PTHR24015 | FAMILY | 2e-136 | 31-442 |
| HMMPanther | PTHR24015:SF27 | PREDICTED: | 2e-136 | 31-442 |
| Seg | seg | seg | NA | 452-463 |
| superfamily | SSF48452 | TPR-like | 4.8e-07 | 197-404 |
Lj5g3v1598340.1 chlo 7, mito 3.5, cyto_mito 2.5, cyto 2
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj5g3v1598340.1 |