Miyakogusa Predicted Gene

Lj5g3v1598300.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L7N5_SOYBN 650 67.7 82.4 (tr|I1L7N5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G02370.1 410 47.4 66.2 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:474516-476383 FORWARD LENGTH=537
Medicago Medtr1g086820.1 615 65.8 79.4 | PPR containing plant protein | HC | chr1:38878473-38875899 | 20130731
Soybean Glyma10g01500.1 650 67.7 82.4  
LJGI gnl|LJGI|FS327158 1350 100.0 100.0 weakly similar to UniRef100_A7Q0P6 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (40%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1598300.1 length: 485 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.014 140-168
175-203
209-236
246-272
HMMTigr TIGR00756 PPR: 0.00013 140-171
175-206
209-236
ProfileScan PS51375 PPR 6.062 138-172
207-241
173-206
243-273
278-312
347-381
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.4e-12 136-374
no_ID  
HMMPanther PTHR24015 FAMILY 2.6e-154 37-451
HMMPanther PTHR24015:SF27 PREDICTED: 2.6e-154 37-451
Seg seg seg NA 9-31
superfamily SSF48452 TPR-like 2.4e-08 205-412
Wolf-PSORT
Lj5g3v1598300.1	mito 7.5, chlo 6, cyto_mito 4.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1598300.1