| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1JBD3_SOYBN | 846 | 80.4 | 90.3 | (tr|I1JBD3) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT1G02420.1 | 633 | 66.0 | 80.4 | | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:493683-495158 FORWARD LENGTH=491 |
| Medicago | Medtr1g086500.1 | 833 | 82.4 | 91.0 | | PPR containing plant-like protein | HC | chr1:38701697-38699329 | 20130731 |
| Soybean | Glyma02g01270.1 | 846 | 80.4 | 90.3 | |
| LJGI | --No_Hits-- |
| Lj5g3v1552110.1 | length: 501 aa. | |||
| IPR002885 | Pentatricopeptide repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF01535 | PPR | 0.0039 | 208-234 384-409 419-443 |
| HMMPfam | PF13041 | PPR_2 | 5e-11 | 236-283 306-352 |
| HMMTigr | TIGR00756 | PPR: | 0.0013 | 239-273 274-308 310-343 419-447 |
| ProfileScan | PS51375 | PPR | 8.616 | 171-201 237-271 272-306 307-341 342-376 377-411 412-446 |
| IPR011990 | Tetratricopeptide-like helical | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.25.40.10 | no description | 1.2e-05 | 339-472 |
| no_ID | ||||
| HMMPanther | PTHR24015 | FAMILY | 3.9e-93 | 10-452 |
| HMMPanther | PTHR24015:SF0 | SUBFAMILY | 3.9e-93 | 10-452 |
Lj5g3v1552110.1 chlo 8, mito 2.5, cyto_mito 2, nucl 1, extr 1, E.R. 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj5g3v1552110.1 |