| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1JBC8_SOYBN | 763 | 78.2 | 85.4 | (tr|I1JBC8) Uncharacterized protein OS=Glycine max PE=3 SV=2 |
| TAIR_pep | AT1G02460.1 | 619 | 71.1 | 84.9 | | Symbols: | Pectin lyase-like superfamily protein | chr1:504897-507099 REVERSE LENGTH=491 |
| Medicago | Medtr1g086390.1 | 747 | 76.4 | 83.5 | | polygalacturonase/glycoside hydrolase family protein | HC | chr1:38659765-38662894 | 20130731 |
| Soybean | Glyma02g01230.1 | 756 | 78.1 | 84.9 | |
| LJGI | --No_Hits-- |
| Lj5g3v1551050.1 | length: 477 aa. | |||
| IPR000743 | Glycoside hydrolase, family 28 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0004650 | polygalacturonase activity | ||
| Biological Process | GO:0005975 | carbohydrate metabolic process | ||
| HMMPfam | PF00295 | Glyco_hydro_28 | 1.6e-94 | 113-430 |
| PatternScan | PS00502 | POLYGALACTURONASE | NA | 301-314 |
| IPR006626 | Parallel beta-helix repeat | |||
| HMMSmart | SM00710 | Parallel | 2.1e+03 | 221-270 271-292 294-314 324-345 353-374 |
| IPR011050 | Pectin lyase fold/virulence factor | |||
| superfamily | SSF51126 | Pectin | 4.8e-128 | 80-460 |
| IPR012334 | Pectin lyase fold | |||
| Gene3D | G3DSA:2.160.20.10 | no description | 1.6e-127 | 68-468 |
| no_ID | ||||
| HMMPanther | PTHR31375 | FAMILY | 1e-190 | 77-477 |
| HMMPanther | PTHR31375:SF0 | SUBFAMILY | 1e-190 | 77-477 |
| Seg | seg | seg | NA | 28-71 348-356 |
Lj5g3v1551050.1 chlo 7, extr 3, nucl 1, cyto 1, mito 1, E.R. 1, cyto_nucl 1, cyto_E.R. 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj5g3v1551050.1 |