Miyakogusa Predicted Gene

Lj5g3v1548910.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1JBB8_SOYBN 1643 78.7 85.7 (tr|I1JBB8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G47070.1 890 49.6 61.2 | Symbols: SPL1 | squamosa promoter binding protein-like 1 | chr2:19337144-19340552 FORWARD LENGTH=881
Medicago Medtr1g086250.1 1537 76.1 82.1 | squamosa promoter-binding-like protein | HC | chr1:38604282-38611936 | 20130731
Soybean Glyma02g01160.1 1496 73.4 79.4  
LJGI gnl|LJGI|TC71229 2765 99.9 99.9 similar to UniRef100_A4PU47 Cluster: Ankyrin; n=1; Medicago truncatula|Rep: Ankyrin - Medicago truncatula (Barrel medic), partial (60%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1548910.1 length: 1003 aa.
IPR004333 Transcription factor, SBP-box
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Gene3D G3DSA:4.10.1100.10 no description 1.2e-31 141-210
HMMPfam PF03110 SBP 4.7e-37 148-225
ProfileScan PS51141 ZF_SBP 31.812 146-223
superfamily SSF103612 SBT 3.8e-37 146-231
IPR020683 Ankyrin repeat-containing domain
Gene3D G3DSA:1.25.40.20 no description 3.1e-06 779-894
superfamily SSF48403 Ankyrin 6.2e-08 780-893
no_ID  
HMMPanther PTHR31251 FAMILY 1.7e-271 1-1003
HMMPanther PTHR31251:SF0 SUBFAMILY 1.7e-271 1-1003
Seg seg seg NA 70-77
240-273
435-446
967-977
Wolf-PSORT
Lj5g3v1548910.1	nucl 8, golg 2, chlo 1, cyto 1, mito 1, vacu 1, chlo_mito 1, golg_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1548910.1