Miyakogusa Predicted Gene

Lj5g3v1536600.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1NBJ6_SOYBN 152 57.1 66.3 (tr|I1NBJ6) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT2G46940.1 124 61.0 75.2 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62070.1); Has 143 Blast hits to 141 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:19286658-19287505 REVERSE LENGTH=252

Medicago Medtr7g110880.1 147 75.3 83.5 | hypothetical protein | HC | chr7:45467317-45468819 | 20130731

Soybean Glyma19g41020.1 152 57.1 66.3

LJGI gnl|LJGI|BP033386 105 86.7 86.7 similar to UniRef100_A7Q0X9 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (61%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v1536600.1 length: 186 aa.

no_ID

method AccNumber shortName E-value location

HMMPanther PTHR31865 FAMILY 1.8e-12 148-186

Seg seg seg NA 4-25

Wolf-PSORT

Lj5g3v1536600.1 nucl 14

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v1536600.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1NBJ6_SOYBN	152	57.1	66.3	(tr\|I1NBJ6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT2G46940.1	124	61.0	75.2	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62070.1); Has 143 Blast hits to 141 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr2:19286658-19287505 REVERSE LENGTH=252
Medicago	Medtr7g110880.1	147	75.3	83.5	\| hypothetical protein \| HC \| chr7:45467317-45468819 \| 20130731
Soybean	Glyma19g41020.1	152	57.1	66.3
LJGI	gnl\|LJGI\|BP033386	105	86.7	86.7	similar to UniRef100_A7Q0X9 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (61%)

no_ID
Lj5g3v1536600.1				length: 186 aa.
method	AccNumber	shortName	E-value	location
HMMPanther	PTHR31865	FAMILY	1.8e-12	148-186
Seg	seg	seg	NA	4-25