Miyakogusa Predicted Gene

Lj5g3v1530040.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7I9I3_MEDTR 519 82.9 88.9 (tr|G7I9I3) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_1g084570 PE=4 SV=1
TAIR_pep AT1G56570.1 331 54.1 71.4 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:21195804-21197721 FORWARD LENGTH=611
Medicago Medtr1g084570.1 519 82.9 88.9 | PPR containing plant-like protein | HC | chr1:37638715-37636265 | 20130731
Soybean Glyma20g22800.1 359 67.3 77.0  
LJGI gnl|LJGI|DC595045 54.0 88.2 88.2 weakly similar to UniRef100_A7NSQ1 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1530040.1 length: 301 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00046 45-68
174-200
246-272
HMMPfam PF13041 PPR_2 1.8e-11 69-115
HMMTigr TIGR00756 PPR: 0.0014 45-71
71-105
174-202
247-272
ProfileScan PS51375 PPR 5.842 69-103
38-68
172-206
140-171
242-276
207-241
no_ID  
HMMPanther PTHR24015 FAMILY 8.5e-73 45-301
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 8.5e-73 45-301
Wolf-PSORT
Lj5g3v1530040.1	mito 8, chlo 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1530040.1