Miyakogusa Predicted Gene

Lj5g3v1518810.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LB41_SOYBN 411 72.0 78.6 (tr|I1LB41) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G56440.1 237 56.6 71.7 | Symbols: TPR5 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:21138765-21141482 REVERSE LENGTH=476
Medicago Medtr1g084100.1 419 73.1 79.6 | TPR domain protein | HC | chr1:37523477-37517409 | 20130731
Soybean Glyma10g28800.1 411 72.0 78.6  
LJGI gnl|LJGI|TC73949 1671 99.3 99.3 similar to UniRef100_Q0DL11 Cluster: Os05g0129900 protein; n=1; Oryza sativa Japonica Group|Rep: Os05g0129900 protein - Oryza sativa subsp. japonica (Rice), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1518810.1 length: 289 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.8e-32 74-190
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 15.796 76-176
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 0.9 76-109
110-142
143-176
ProfileScan PS50005 TPR 7.729 76-109
143-176
no_ID  
Coil coil coiled-coil NA 176-197
HMMPanther PTHR22904 TPR 2.8e-81 41-219
HMMPanther PTHR22904:SF146AAR054CP T[41-219] 2.8e-81  
HMMPfam PF13414 TPR_11 2.4e-18 75-139
superfamily SSF48452 TPR-like 4.8e-28 67-192
Wolf-PSORT
Lj5g3v1518810.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1518810.1