Miyakogusa Predicted Gene

Lj5g3v1514670.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7I9H2_MEDTR 620 75.2 79.2 (tr|G7I9H2) Calreticulin OS=Medicago truncatula GN=MTR_1g083960 PE=1 SV=1
TAIR_pep AT1G09210.1 584 80.6 87.1 | Symbols: CRT1b, AtCRT1b | calreticulin 1b | chr1:2973217-2976655 REVERSE LENGTH=424
Medicago Medtr1g083960.1 620 75.2 79.2 | calreticulin | HC | chr1:37417653-37414042 | 20130731
Soybean Glyma10g28890.2 599 84.3 87.9  
LJGI gnl|LJGI|TC58309 2492 100.0 100.0 homologue to UniRef100_A0A762 Cluster: Calreticulin-1; n=1; Glycine max|Rep: Calreticulin-1 - Glycine max (Soybean), partial (93%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1514670.1 length: 418 aa.
IPR001580 Calreticulin/calnexin
method AccNumber shortName E-value location
Molecular Function GO:0005509 calcium ion binding    
Cellular Component GO:0005783 endoplasmic reticulum    
Biological Process GO:0006457 protein folding    
Molecular Function GO:0051082 unfolded protein binding    
FPrintScan PR00626 CALRETICULIN 8.8e-55 100-118
126-142
215-228
243-265
281-300
314-334
HMMPanther PTHR11073 CALRETICULIN 5.5e-245 1-417
HMMPfam PF00262 Calreticulin 1.1e-117 22-333
IPR008985 Concanavalin A-like lectin/glucanases superfamily
superfamily SSF49899 Concanavalin 0.00084 12-226
312-350
IPR009033 Calreticulin/calnexin, P domain
Molecular Function GO:0005509 calcium ion binding    
Molecular Function GO:0005515 protein binding    
superfamily SSF63887 P-domain 1.6e-43 201-317
IPR009169 Calreticulin
Molecular Function GO:0005509 calcium ion binding    
Cellular Component GO:0005783 endoplasmic reticulum    
Biological Process GO:0006457 protein folding    
Molecular Function GO:0051082 unfolded protein binding    
HMMPIR PIRSF002356 Calreticulin 1.7e-282 1-418
IPR013320 Concanavalin A-like lectin/glucanase, subgroup
Gene3D G3DSA:2.60.120.200 no description 1.2e-99 14-239
IPR018124 Calreticulin/calnexin, conserved site
Molecular Function GO:0005509 calcium ion binding    
PatternScan PS00803 CALRETICULIN_1 NA 98-113
PatternScan PS00804 CALRETICULIN_2 NA 130-138
PatternScan PS00805 CALRETICULIN_REPEAT NA 243-255
208-220
no_ID  
Coil coil coiled-coil NA 350-373
HMMPanther PTHR11073:SF2 CALRETICULIN 5.5e-245 1-417
Seg seg seg NA 245-264
352-399
Wolf-PSORT
Lj5g3v1514670.1	E.R. 6, vacu 5, extr 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1514670.1 Not targeted -47.600 0 -12.707 69.90% -34.893