Miyakogusa Predicted Gene

Lj5g3v1514610.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LB58_SOYBN 752 74.4 86.0 (tr|I1LB58) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G09190.1 552 54.0 73.4 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:2966263-2967717 REVERSE LENGTH=484
Medicago Medtr1g083890.1 746 72.9 84.3 | PPR containing plant-like protein | HC | chr1:37365601-37367754 | 20130731
Soybean Glyma10g28930.1 735 74.3 85.8  
LJGI gnl|LJGI|FS326911 1156 100.0 100.0 similar to UniRef100_A7PRT7 Cluster: Chromosome chr14 scaffold_27, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_27, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1514610.1 length: 484 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.041 176-203
280-306
380-404
HMMPfam PF13041 PPR_2 8.2e-08 204-251
306-352
HMMPfam PF13812 PPR_3 0.041 74-102
HMMTigr TIGR00756 PPR: 0.00044 175-205
206-239
280-307
308-337
ProfileScan PS51375 PPR 5.667 71-105
107-141
204-238
173-203
142-172
239-273
306-336
275-305
340-370
376-410
442-476
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 4e-05 408-440
no_ID  
HMMPanther PTHR24015 FAMILY 2.1e-180 12-481
HMMPanther PTHR24015:SF100SUBFAMILY NOT 2.1e-180 12-481
Wolf-PSORT
Lj5g3v1514610.1	chlo 7, mito 6.5, cyto_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1514610.1