Miyakogusa Predicted Gene

Lj5g3v1513590.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7I9F7_MEDTR 1000 90.8 93.8 (tr|G7I9F7) Importin subunit alpha OS=Medicago truncatula GN=MTR_1g083810 PE=3 SV=1
TAIR_pep AT3G06720.2 871 79.9 87.5 | Symbols: AT-IMP, ATKAP ALPHA, AIMP ALPHA | importin alpha isoform 1 | chr3:2120559-2123555 FORWARD LENGTH=532
Medicago Medtr1g083810.2 1000 90.8 93.8 | importin subunit alpha-1b | HC | chr1:37313235-37307798 | 20130731
Soybean Glyma10g29000.1 994 89.1 94.6  
LJGI gnl|LJGI|TC74697 3132 99.5 99.5 homologue to UniRef100_A7PRV4 Cluster: Chromosome chr14 scaffold_27, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_27, whole genome shotgun sequence - Vitis vinifera (Grape), partial (95%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1513590.1 length: 534 aa.
IPR000225 Armadillo
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00514 Arm 8.2e-07 109-148
150-189
192-233
246-274
277-315
319-359
361-400
406-443
HMMSmart SM00185 Armadillo/beta-catenin-like 6.7e-06 107-148
150-190
191-233
235-274
276-316
318-359
361-401
404-444
ProfileScan PS50176 ARM_REPEAT 10.027 161-203
118-161
245-287
IPR002652 Importin-alpha, importin-beta-binding domain
Cellular Component GO:0005634 nucleus    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006606 protein import into nucleus    
Molecular Function GO:0008565 protein transporter activity    
HMMPfam PF01749 IBB 1.8e-25 8-98
ProfileScan PS51214 IBB 15.192 1-60
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 1.8e-137 14-500
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 1.6e-130 5-503
no_ID  
HMMPanther PTHR23316 IMPORTIN 2.6e-280 8-518
Seg seg seg NA 39-55
Wolf-PSORT
Lj5g3v1513590.1	nucl 6, chlo 3, nucl_plas 3, mito 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1513590.1