Miyakogusa Predicted Gene

Lj5g3v1513570.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7I9F5_MEDTR 394 76.4 82.1 (tr|G7I9F5) Syntaxin OS=Medicago truncatula GN=MTR_1g083790 PE=3 SV=1
TAIR_pep AT3G05710.2 338 65.9 73.6 | Symbols: SYP43, ATSYP43 | syntaxin of plants 43 | chr3:1685262-1687229 FORWARD LENGTH=331
Medicago Medtr1g083790.1 394 76.4 82.1 | syntaxin of plants protein | HC | chr1:37298710-37303799 | 20130731
Soybean Glyma20g38300.1 387 76.2 80.0  
LJGI gnl|LJGI|CN825133 1271 100.0 100.0 similar to UniRef100_Q9SUJ1 Cluster: Syntaxin-43; n=1; Arabidopsis thaliana|Rep: Syntaxin-43 - Arabidopsis thaliana (Mouse-ear cress), partial (66%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1513570.1 length: 237 aa.
IPR006011 Syntaxin, N-terminal
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
HMMPfam PF00804 Syntaxin 8.9e-12 75-170
HMMSmart SM00503 Syntaxin 5.1e-18 68-183
IPR010989 t-SNARE
Cellular Component GO:0016020 membrane    
Biological Process GO:0016192 vesicle-mediated transport    
superfamily SSF47661 t-snare 6.8e-26 71-236
no_ID  
Coil coil coiled-coil NA 81-102
Gene3D G3DSA:1.20.58.70 no description 2.6e-20 73-189
HMMPanther PTHR19957 SYNTAXIN 1.1e-95 4-235
HMMPanther PTHR19957:SF60 SUBFAMILY 1.1e-95 4-235
Seg seg seg NA 23-33
Wolf-PSORT
Lj5g3v1513570.1	chlo 6, nucl 4, mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1513570.1