Miyakogusa Predicted Gene

Lj5g3v1513550.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N5B7_SOYBN 771 67.1 72.8 (tr|K7N5B7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G05670.1 432 49.0 61.6 | Symbols: | RING/U-box protein | chr3:1653888-1657022 FORWARD LENGTH=883
Medicago Medtr7g112410.1 679 58.2 65.8 | poxvirus Ag35 surface protein | HC | chr7:46190529-46186663 | 20130731
Soybean Glyma20g38280.1 769 67.1 72.8  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1513550.1 length: 878 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 6.8e-08 436-480
HMMSmart SM00184 Ring 1.8e-05 437-478
ProfileScan PS50089 ZF_RING_2 12.017 437-479
IPR001965 Zinc finger, PHD-type
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 PHD 2.4e-08 529-574
IPR011011 Zinc finger, FYVE/PHD-type
superfamily SSF57903 FYVE/PHD 6.4e-15 492-574
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 3e-11 435-482
519-576
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 456-465
IPR019787 Zinc finger, PHD-finger
Molecular Function GO:0005515 protein binding    
HMMPfam PF00628 PHD 3.8e-10 529-575
ProfileScan PS50016 ZF_PHD_2 9.588 527-576
no_ID  
Coil coil coiled-coil NA 105-126
149-186
203-254
HMMPanther PTHR15242 SPLICING 2.4e-69 342-675
HMMPanther PTHR15242:SF0 SUBFAMILY 2.4e-69 342-675
Seg seg seg NA 3-35
65-69
108-118
136-148
153-178
207-284
328-345
360-368
375-389
398-416
616-631
654-659
superfamily SSF57850 RING/U-box 8.1e-12 436-485
Wolf-PSORT
Lj5g3v1513550.1	nucl 10, mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1513550.1