Miyakogusa Predicted Gene

Lj5g3v1498040.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NJ19_SOYBN 291 78.5 82.3 (tr|I1NJ19) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G09140.1 258 71.0 78.0 | Symbols: ATSRP30, SR30, At-SR30 | SERINE-ARGININE PROTEIN 30 | chr1:2942887-2945818 REVERSE LENGTH=268
Medicago Medtr1g083400.1 290 75.8 81.7 | pre-mRNA-splicing factor SF2-like protein | HC | chr1:37124801-37119597 | 20130731
Soybean Glyma20g38060.2 291 78.5 82.3  
LJGI gnl|LJGI|TC67598 1007 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1498040.2 length: 249 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 2.1e-10 9-76
113-175
HMMSmart SM00360 RNA 3.5e-06 8-78
112-181
ProfileScan PS50102 RRM 9.593 7-82
111-189
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 1e-24 2-86
107-201
no_ID  
HMMPanther PTHR10548 SPLICING 9.1e-112 2-227
HMMPanther PTHR10548:SF13 SPLICING 9.1e-112 2-227
Seg seg seg NA 82-112
187-229
superfamily SSF54928 RNA-binding 9.2e-32 4-192
Wolf-PSORT
Lj5g3v1498040.2	cyto 6, chlo 5, mito 1, plas 1, golg 1, golg_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1498040.2